BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E03LP1|AL425702
(767 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1289 0.0
>3x_Contig1763
Length = 22654
Score = 1289 bits (645), Expect = 0.0
Identities = 652/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 116 acgctgcaaattgtgcaagacttatatttatcttgggaattataaaactaaatttcatcc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2556 acgctgcaaattgtgcaagacttatatttatcttgggaattataaaactaaatttcatcc 2497
Query: 176 tgaccgttaaatcagagataaacaccttttcctaacgacgaatatcgatttctacgcttc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2496 tgaccgttaaatcagagataaacaccttttcctaacgacgaatatcgatttctacgcttc 2437
Query: 236 atcacaaaaggaatgcatgtcacatcattccacgcatcagcctgtcagatgcactggcta 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 atcacaaaaggaatgcatgtcacatcattccacgcatcagcctgtcagatgcactggcta 2377
Query: 296 tacttcactctattgacaattcctcgtcgtcatcaaaggaaatatcttcttgaattgcca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 tacttcactctattgacaattcctcgtcgtcatcaaaggaaatatcttcttgaattgcca 2317
Query: 356 attcagcctcctcttgcaccttcgacagtccacttaattgctccacacacttataatcat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 attcagcctcctcttgcaccttcgacagtccacttaattgctccacacacttataatcat 2257
Query: 416 ctagcgcctgtttcacgaaattccatccgttttcctttagagttaaaatgacattttcat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 ctagcgcctgtttcacgaaattccatccgttttcctttagagttaaaatgacattttcat 2197
Query: 476 tgcttgcacaacagtgctgatatgccggtgtttcaagttttacagttttaaattcattta 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 tgcttgcacaacagtgctgatatgccggtgtttcaagttttacagttttaaattcattta 2137
Query: 536 gaaatcctcgtatttgatgcggag-tgacccaagcacgttcgtcgaaggctgaagatatg 594
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2136 gaaatcctcgtatttgatgcggagctgacccaagcacgttcgtcgaaggctgaagatatg 2077
Query: 595 tcaccaataattcaacagcctgggaagccgctaatagggcaacacccggtctagttacag 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 tcaccaataattcaacagcctgggaagccgctaatagggcaacacccggtctagttacag 2017
Query: 655 tacacatctgatctaatgttctgtcagttagagaatcacttggggccacgatatcgttac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 tacacatctgatctaatgttctgtcagttagagaatcacttggggccacgatatcgttac 1957
Query: 715 agaaatagcaacccaggttgtcattattgttgccatgtctcattaccaaataa 767
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 agaaatagcaacccaggttgtcattattgttgccatgtctcattaccaaataa 1904
Score = 146 bits (73), Expect = 7e-35
Identities = 93/99 (93%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 1 acaccacaattggataacgagtttaawtctacatctaaaacatgcctggtataagctgat 60
|||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2670 acaccacagtcggataacgagtttag-tctacatctaaaacatgcctggtataagctgat 2612
Query: 61 ggatcacggaaaaaggcccagtaatgtaggtgtacmaag 99
|||||||||||||||||||||| |||||||||||| |||
Sbjct: 2611 ggatcacggaaaaaggcccagttatgtaggtgtaccaag 2573
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4819
Number of Sequences: 1807
Number of extensions: 4819
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 767
length of database: 10,358,551
effective HSP length: 16
effective length of query: 751
effective length of database: 10,329,639
effective search space: 7757558889
effective search space used: 7757558889
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)